ThaleMine: Keyword Search (2024)

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0.041s

Hits by Organism

A. thaliana: 5

Type

Details

Score

Gene

AT5G17430 | locus:2178915 | BBM | BABY BOOM

Length:	3356
Chromosome Location:	Chr5: 5742393-5745748
Organism . Short Name:	A. thaliana
TAIR Computational Description:	Integrase-type DNA-binding superfamily protein;(source:Araport11)
TAIR Curator Summary:	Encodes an AP2-domain containing protein similar to ANT. Expressed in embryos and lateral root primordium. PLT4 acts after PLT3,5 and 7 during lateral roof formation.
TAIR Short Description:	Integrase-type DNA-binding superfamily protein
TAIR Aliases:	BBM, PLT4

•

Protein

A0A1R7T398_ARATH | A0A1R7T398

Organism . Name:	Arabidopsis thaliana
Length:	522

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Ontology Term Synonym

Name:	Sonic hedgehog signaling pathway
Type:	synonym

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Publication

15335822

First Author:	Vaux DL
Title:	A boom time for necrobiology.
Year:	1993
Journal:	Curr Biol
Volume:	3
Pages:	877-8

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Ontology Term Synonym

Name:	Alzheimers University of Toronto
Type:	synonym

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GeneRIF (Gene Reference into Function)

Annotation:	BABY BOOM regulates early embryo and endosperm development.
Organism:	A. thaliana
Gene:	BBM
PubMed Id:	35709319

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Interaction Term

MI:2186 | alut

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Publication

35709319

First Author:	Chen B
Title:	BABY BOOM regulates early embryo and endosperm development.
Year:	2022
Journal:	Proc Natl Acad Sci U S A
Volume:	119
Pages:	e2201761119

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Ontology Term Synonym

Name:	Alzheimers Project at University of Toronto
Type:	synonym

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mRNA

AT5G17430.1

Length:	2084
Chromosome Location:	Chr5: 5742393-5745748

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mRNA

AT5G17430.2

Length:	1878
Chromosome Location:	Chr5: 5742401-5745220

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Author

Boom WH

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Publication

12172019

First Author:	Boutilier K
Title:	Ectopic expression of BABY BOOM triggers a conversion from vegetative to embryonic growth.
Year:	2002
Journal:	Plant Cell
Volume:	14
Pages:	1737-49

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Publication

11668681

First Author:	Izraeli S
Title:	Genetic evidence that Sil is required for the Sonic Hedgehog response pathway.
Year:	2001
Journal:	Genesis
Volume:	31
Pages:	72-7

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Publication

18663586

First Author:	Passarinho P
Title:	BABY BOOM target genes provide diverse entry points into cell proliferation and cell growth pathways.
Year:	2008
Journal:	Plant Mol Biol
Volume:	68
Pages:	225-37

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Publication

11449277

First Author:	Eggenschwiler JT
Title:	Rab23 is an essential negative regulator of the mouse Sonic hedgehog signalling pathway.
Year:	2001
Journal:	Nature
Volume:	412
Pages:	194-8

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Publication

29290584

First Author:	Pusapati GV
Title:	CRISPR Screens Uncover Genes that Regulate Target Cell Sensitivity to the Morphogen Sonic Hedgehog.
Year:	2018
Journal:	Dev Cell
Volume:	44
Pages:	113-129.e8

•

Publication

1655709

First Author:	Vanden Boom TJ
Title:	Lipoic acid metabolism in Escherichia coli: isolation of null mutants defective in lipoic acid biosynthesis, molecular cloning and characterization of the E. coli lip locus, and identification of the lipoylated protein of the glycine cleavage system.
Year:	1991
Journal:	J Bacteriol
Volume:	173
Pages:	6411-20

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Publication

21209331

First Author:	Qin J
Title:	Intraflagellar transport protein 122 antagonizes Sonic Hedgehog signaling and controls ciliary localization of pathway components.
Year:	2011
Journal:	Proc Natl Acad Sci U S A
Volume:	108
Pages:	1456-61

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Author

Vanden Boom TJ

•

Author

van Boom JH

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Protein Domain

IPR039857

•

Publication

11532916

First Author:	ten Berge D
Title:	Prx1 and Prx2 are upstream regulators of sonic hedgehog and control cell proliferation during mandibular arch morphogenesis.
Year:	2001
Journal:	Development
Volume:	128
Pages:	2929-38

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Publication

7477329

First Author:	Hall TM
Title:	A potential catalytic site revealed by the 1.7-A crystal structure of the amino-terminal signalling domain of Sonic hedgehog.
Year:	1995
Journal:	Nature
Volume:	378
Pages:	212-6

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Publication

28965847

First Author:	De Mori R
Title:	Hypomorphic Recessive Variants in SUFU Impair the Sonic Hedgehog Pathway and Cause Joubert Syndrome with Cranio-facial and Skeletal Defects.
Year:	2017
Journal:	Am J Hum Genet
Volume:	101
Pages:	552-563

•

GO Term

GO:0007605 | sensory perception of sound

Description:

The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound.

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Protein Domain

IPR026123

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Author

van den Boom J

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Protein Domain

IPR034114

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Protein

BBM_ARATH | Q6PQQ4

Organism . Name:	Arabidopsis thaliana
Length:	584

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GO Term

GO:0007224 | smoothened signaling pathway

Description:

The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened.

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Ontology Term

- | Hearing

Description:

Protein involved in hearing, the special sense by which an organism is able to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound

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Publication

19000668

First Author:	Cortellino S
Title:	Defective ciliogenesis, embryonic lethality and severe impairment of the Sonic Hedgehog pathway caused by inactivation of the mouse complex A intraflagellar transport gene Ift122/Wdr10, partially overlapping with the DNA repair gene Med1/Mbd4.
Year:	2009
Journal:	Dev Biol
Volume:	325
Pages:	225-37